The Role of Ala198 in the Stability and Coenzyme Specificity of Bacterial Formate Dehydrogenases
- Authors: Alekseeva A.A.1,2, Fedorchuk V.V.2,3, Zarubina S.A.2,3, Sadykhov E.G.1, Matorin A.D.3, Savin S.S.1,2,3, Tishkov V.I.1,2,3
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Affiliations:
- A.N. Bach Institute of Biochemistry
- Innovations and High Technologies MSU Ltd
- M.V. Lomonosov Moscow State University
- Issue: Vol 7, No 1 (2015)
- Pages: 60-69
- Section: Research Articles
- Submitted: 17.01.2020
- Published: 15.03.2015
- URL: https://actanaturae.ru/2075-8251/article/view/10513
- DOI: https://doi.org/10.32607/20758251-2015-7-1-60-69
- ID: 10513
Cite item
Abstract
It has been shown by an X-ray structural analysis that the amino acid residues Ala198, which are located in the coenzyme-binding domain of NAD+-dependent formate dehydrogenases (EC 1.2.1.2., FDH) from bacteria Pseudomonas sp.101 and Moraxella sp. C-1 (PseFDH and MorFDH, respectively), have non-optimal values of the angles ψ and φ. These residues were replaced with Gly by site-directed mutagenesis. The mutants PseFDH A198G and MorFDH A198G were expressed in E.coli cells and obtained in active and soluble forms with more than 95% purity. The study of thermal inactivation kinetics showed that the mutation A198G results in a 2.5- fold increase in stability compared to one for the wild-type enzymes. Kinetic experiments indicate that A198G replacement reduces the K M NAD+ value from 60 to 35 and from 80 to 45 μM for PseFDH and MorFDH, respectively, while the K M HCOO- value remains practically unchanged. Amino acid replacement A198G was also added to the mutant PseFDH D221S with the coenzyme specificity changed from NAD + to NADP +. In this case, an increase in thermal stability was also observed, but the influence of the mutation on the kinetic parameters was opposite: KM increased from 190 to 280 μM and from 43 to 89 mM for NADP + and formate, respectively. According to the data obtained, inference could be drawn that earlier formate dehydrogenase from bacterium Pseudomonas sp. 101 was specific to NADP +, but not to NAD +.
About the authors
A. A. Alekseeva
A.N. Bach Institute of Biochemistry; Innovations and High Technologies MSU Ltd
Author for correspondence.
Email: vitishkov@gmail.com
Russian Federation
V. V. Fedorchuk
Innovations and High Technologies MSU Ltd; M.V. Lomonosov Moscow State University
Email: vitishkov@gmail.com
Russian Federation
S. A. Zarubina
Innovations and High Technologies MSU Ltd; M.V. Lomonosov Moscow State University
Email: vitishkov@gmail.com
Russian Federation
E. G. Sadykhov
A.N. Bach Institute of Biochemistry
Email: vitishkov@gmail.com
Russian Federation
A. D. Matorin
M.V. Lomonosov Moscow State University
Email: vitishkov@gmail.com
Russian Federation
S. S. Savin
A.N. Bach Institute of Biochemistry; Innovations and High Technologies MSU Ltd; M.V. Lomonosov Moscow State University
Email: vitishkov@gmail.com
Russian Federation
V. I. Tishkov
A.N. Bach Institute of Biochemistry; Innovations and High Technologies MSU Ltd; M.V. Lomonosov Moscow State University
Email: vitishkov@gmail.com
Russian Federation
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