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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="review-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Acta Naturae</journal-id><journal-title-group><journal-title xml:lang="en">Acta Naturae</journal-title><trans-title-group xml:lang="ru"><trans-title>Acta Naturae</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2075-8251</issn><publisher><publisher-name xml:lang="en">Acta Naturae Ltd</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">27881</article-id><article-id pub-id-type="doi">10.32607/actanaturae.27881</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Reviews</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Обзоры</subject></subj-group><subj-group subj-group-type="article-type"><subject>Review Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Long non-coding RNAs: allies and enemies of HIV infection</article-title><trans-title-group xml:lang="ru"><trans-title>Длинные некодирующие РНК: союзники и враги ВИЧ-инфекции</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Kikhai</surname><given-names>T. F.</given-names></name><name xml:lang="ru"><surname>Кихай</surname><given-names>Т. Ф.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Faculty of Chemistry</p></bio><bio xml:lang="ru"><p>химический факультет</p></bio><email>kih.t1996@yandex.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Mashkovskaia</surname><given-names>A. V.</given-names></name><name xml:lang="ru"><surname>Машковская</surname><given-names>А. В.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Faculty of Bioengineering and Bioinformatics</p></bio><bio xml:lang="ru"><p>факультет биоинженерии и биоинформатики</p></bio><email>kih.t1996@yandex.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Oretskaya</surname><given-names>T. S.</given-names></name><name xml:lang="ru"><surname>Орецкая</surname><given-names>Т. С.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>kih.t1996@yandex.ru</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Agapkina</surname><given-names>Y. Y.</given-names></name><name xml:lang="ru"><surname>Агапкина</surname><given-names>Ю. Ю.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Faculty of Chemistry</p></bio><bio xml:lang="ru"><p>химический факультет</p></bio><email>kih.t1996@yandex.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Gottikh</surname><given-names>M. B.</given-names></name><name xml:lang="ru"><surname>Готтих</surname><given-names>M. Б.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Faculty of Chemistry</p></bio><bio xml:lang="ru"><p>химический факультет</p></bio><email>gottikh@belozersky.msu.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Lomonosov Moscow State University</institution></aff><aff><institution xml:lang="ru">Московский государственный университет им. М.В. Ломоносова</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University</institution></aff><aff><institution xml:lang="ru">Научно-исследовательский институт физико-химической биологии им. А.Н. Белозерского Московского государственного университета им. М.В. Ломоносова</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2026-07-23" publication-format="electronic"><day>23</day><month>07</month><year>2026</year></pub-date><volume>18</volume><issue>2</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>20</fpage><lpage>35</lpage><history><date date-type="received" iso-8601-date="2025-11-11"><day>11</day><month>11</month><year>2025</year></date><date date-type="accepted" iso-8601-date="2026-04-20"><day>20</day><month>04</month><year>2026</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2026, Kikhai T.F., Mashkovskaia A.V., Oretskaya T.S., Agapkina Y.Y., Gottikh M.B.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2026, Кихай Т.Ф., Машковская А.В., Орецкая Т.С., Агапкина Ю.Ю., Готтих M.Б.</copyright-statement><copyright-year>2026</copyright-year><copyright-holder xml:lang="en">Kikhai T.F., Mashkovskaia A.V., Oretskaya T.S., Agapkina Y.Y., Gottikh M.B.</copyright-holder><copyright-holder xml:lang="ru">Кихай Т.Ф., Машковская А.В., Орецкая Т.С., Агапкина Ю.Ю., Готтих M.Б.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://actanaturae.ru/2075-8251/article/view/27881">https://actanaturae.ru/2075-8251/article/view/27881</self-uri><abstract xml:lang="en"><p>Long non-coding RNAs (lncRNAs) are involved in various biological processes, including chromatin modification, cell differentiation, pre-mRNA splicing, translation, etc. Recent studies have revealed that lncRNAs can have a significant impact on the pathogenesis of viral infections by acting as both positive and negative regulators of viral gene expression. This review summarizes the available data on lncRNAs associated with human immunodeficiency virus type 1 (HIV-1). LncRNAs can regulate both the active replication cycle and the latent phase of the HIV-1 infection, during which the integrated proviral DNA remains transcriptionally silent. Moreover, lncRNAs may serve as diagnostic markers and are potential therapeutic targets. A deeper understanding of the intricate interactions between lncRNAs and HIV-1 is essential for developing innovative treatments for the HIV infection and the associated acquired immunodeficiency syndrome (AIDS).</p></abstract><trans-abstract xml:lang="ru"><p>Длинные некодирующие РНК (днРНК) участвуют в различных биологических процессах, включая модификацию хроматина, дифференцировку клеток, транскрипцию и сплайсинг пре-мРНК, трансляцию и т.д. В последнее время появляется все больше данных о том, что днРНК влияют на развитие вирусных инфекций, выступая как положительные, так и отрицательные регуляторы. В настоящем обзоре мы постарались суммировать данные о днРНК, связанных с инфекцией, вызываемой вирусом иммунодефицита человека первого типа (ВИЧ-1). днРНК могут влиять как на активную репликацию, так и на латентное состояние ВИЧ-1, при котором интегрированная провирусная ДНК находится в транскрипционно неактивном состоянии. Более того, днРНК могут представлять собой как диагностические биомаркеры, так и новые мишени для разработки терапевтических средств. Более глубокое понимание сложного взаимодействия между днРНК и ВИЧ-1 поможет разработать инновационные методы лечения ВИЧ-инфекции и синдрома приобретенного иммунодефицита (СПИД).</p></trans-abstract><kwd-group xml:lang="en"><kwd>type 1 diabetes mellitus</kwd><kwd>genetic predisposition</kwd><kwd>epigenetic modifications</kwd><kwd>trigger mechanisms</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>длинные некодирующие РНК</kwd><kwd>вирус иммунодефицита человека</kwd><kwd>репликация</kwd><kwd>латентность</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="en">Russian Science Foundation</institution></institution-wrap><institution-wrap><institution xml:lang="ru">Российский научный фонд</institution></institution-wrap></funding-source><award-id>21-64-00006-П</award-id></award-group><funding-statement xml:lang="en">This work was supported by the Russian Science Foundation (grant No. 21-64-00006)</funding-statement><funding-statement xml:lang="ru">Работа выполнена при финансовой поддержке Российского научного фонда (грант № 21-64-00006-П)</funding-statement></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Li Z, Ott M. 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