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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Acta Naturae</journal-id><journal-title-group><journal-title xml:lang="en">Acta Naturae</journal-title><trans-title-group xml:lang="ru"><trans-title>Acta Naturae</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2075-8251</issn><publisher><publisher-name xml:lang="en">Acta Naturae Ltd</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">27602</article-id><article-id pub-id-type="doi">10.32607/actanaturae.27602</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Research Articles</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Экспериментальные статьи</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en"><italic>Cis</italic>-Regulatory Function of the <italic>Pou5f1</italic> Gene Promoter in the Mouse MHC Locus</article-title><trans-title-group xml:lang="ru"><trans-title><italic>Цис</italic>-регуляторная функция промотора гена <italic>Pou5f1</italic> в MHC-локусе мыши</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Ermakova</surname><given-names>V. V.</given-names></name><name xml:lang="ru"><surname>Ермакова</surname><given-names>В. В.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>a.kuzmin@incras.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Aleksandrova</surname><given-names>E. V.</given-names></name><name xml:lang="ru"><surname>Александрова</surname><given-names>Е. В.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>a.kuzmin@incras.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Kuzmin</surname><given-names>A. A.</given-names></name><name xml:lang="ru"><surname>Кузьмин</surname><given-names>А. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>a.kuzmin@incras.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Tomilin</surname><given-names>A. N.</given-names></name><name xml:lang="ru"><surname>Томилин</surname><given-names>А. Н.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>a.tomilin@incras.ru</email><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Institute of Cytology of the Russian Academy of Sciences</institution></aff><aff><institution xml:lang="ru">Институт цитологии Российской академии наук</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2025-07-25" publication-format="electronic"><day>25</day><month>07</month><year>2025</year></pub-date><volume>17</volume><issue>2</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>64</fpage><lpage>74</lpage><history><date date-type="received" iso-8601-date="2024-12-24"><day>24</day><month>12</month><year>2024</year></date><date date-type="accepted" iso-8601-date="2025-02-28"><day>28</day><month>02</month><year>2025</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2025, Ermakova V.V., Aleksandrova E.V., Kuzmin A.A., Tomilin A.N.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2025, Ермакова В.В., Александрова Е.В., Кузьмин А.А., Томилин А.Н.</copyright-statement><copyright-year>2025</copyright-year><copyright-holder xml:lang="en">Ermakova V.V., Aleksandrova E.V., Kuzmin A.A., Tomilin A.N.</copyright-holder><copyright-holder xml:lang="ru">Ермакова В.В., Александрова Е.В., Кузьмин А.А., Томилин А.Н.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://actanaturae.ru/2075-8251/article/view/27602">https://actanaturae.ru/2075-8251/article/view/27602</self-uri><abstract xml:lang="en"><p>The <italic>Pou5f1</italic> gene encodes the Oct4 protein, one of the key transcription factors required for maintaining the pluripotent state of epiblast cells and the viability of germ cells. However, functional genetics provides convincing evidence that <italic>Pou5f1</italic> has a broader range of functions in mouse ontogeny, including suppression of atherosclerotic processes. Related studies have primarily focused on the functions of the Oct4 protein, while the regulatory sequences within the <italic>Pou5f1</italic> gene have not been considered. In this study, we have developed a genetic model which is based on mouse embryonic stem cells (ESCs) for assessing the roles of the <italic>Pou5f1</italic> gene promoter in the transcriptional regulation of neighboring genes within the major histocompatibility complex<italic> </italic>(MHC) locus. We have demonstrated that deletion of this promoter affects the expression of selected genes within this locus neither in ESCs nor in the trophoblast derivatives of these cells. A notable exception is the <italic>Tcf19</italic> gene, which is upregulated upon <italic>Pou5f1</italic> promoter deletion and might be associated with the atherosclerosis pathology due to its pro-inflammatory activity. The developed genetic model will pave the way for future studies into the functional contribution of the <italic>cis</italic>-regulatory association of <italic>Pou5f1, Tcf19</italic>, and, possibly, other genes with the atherosclerotic phenotype previously reported for mice carrying the <italic>Pou5f1</italic> promoter deletion in vascular endothelial and smooth muscle cells.</p></abstract><trans-abstract xml:lang="ru"><p>Ген <italic>Pou</italic><italic>5</italic><italic>f</italic><italic>1 </italic>кодирует белок Oct4 – один из ключевых транскрипционных факторов, необходимых для поддержания плюрипотентного состояния клеток эпибласта и жизнеспособности половых клеток. Однако с использованием методов функциональной генетики были получены убедительные данные, свидетельствующие о более широком спектре функций <italic>Pou</italic><italic>5</italic><italic>f</italic><italic>1 </italic>в онтогенезе мыши, в частности, в сдерживании атеросклеротических процессов. При изучении данного аспекта акцент делался на функциях белка Oct4, тогда как вклад регуляторных последовательностей, расположенных в границах гена <italic>Pou5f1</italic>, в реализацию этих неканонических функций не рассматривался. В настоящей работе на основе эмбриональных стволовых клеток (ЭСК) мыши нами создана генетическая модель, позволяющая оценить влияние промотора гена <italic>Pou</italic><italic>5</italic><italic>f</italic><italic>1</italic> на транскрипцию окружающих его генов Major Histocompatibility Complex (MHC)-локуса. Нами показано, что делеция этого промотора не оказывает существенного влияния на экспрессию ряда генов данного локуса ни в ЭСК, ни в трофобластных производных этих клеток. Важное исключение составил ген <italic>Tcf</italic><italic>19</italic>, который активировался при такой делеции и который может быть ассоциирован с патологией атеросклероза через свое провоспалительное действие. При дальнейшем использовании разработанная генетическая модель позволит оценить вклад <italic>цис</italic>-регуляторной связи <italic>Pou</italic><italic>5</italic><italic>f</italic><italic>1</italic> с <italic>Tcf</italic><italic>19</italic> и, возможно, с другими генами<italic> </italic>в описанный ранее атеросклеротический фенотип мышей, несущих делецию промотора гена <italic>Pou</italic><italic>5</italic><italic>f</italic><italic>1 </italic>в<italic> </italic>гладкомышечных и эндотелиальных клетках кровеносных сосудов.</p></trans-abstract><kwd-group xml:lang="en"><kwd>Pou5f1</kwd><kwd>Oct4</kwd><kwd>embryonic stem cells (ESCs)</kwd><kwd>major histocompatibility complex</kwd><kwd>trophectoderm</kwd><kwd>regulation of gene expression</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>Pou5f1</kwd><kwd>Oct4</kwd><kwd>эмбриональные стволовые клетки (ЭСК)</kwd><kwd>Major Histocompatibility Complex (MHC)</kwd><kwd>трофэктодерма</kwd><kwd>регуляция экспрессии генов</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="en">Ministry of Science and Higher Education of the Russian Federation</institution></institution-wrap><institution-wrap><institution xml:lang="ru">Министерство науки и высшего образования Российской Федерации</institution></institution-wrap></funding-source><award-id>075-15-2021-1075</award-id></award-group><award-group><funding-source><institution-wrap><institution xml:lang="en">Russian Science Foundation</institution></institution-wrap><institution-wrap><institution xml:lang="ru">Российский научный фонд</institution></institution-wrap></funding-source><award-id>№24-75-10131</award-id></award-group></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Takahashi K., Yamanaka S. // Cell. 2006. 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