<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE root>
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Acta Naturae</journal-id><journal-title-group><journal-title xml:lang="en">Acta Naturae</journal-title><trans-title-group xml:lang="ru"><trans-title>Acta Naturae</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2075-8251</issn><publisher><publisher-name xml:lang="en">Acta Naturae Ltd</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">10695</article-id><article-id pub-id-type="doi">10.32607/20758251-2011-3-1-69-76</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Articles</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Статьи</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Structural and Dynamic Study of the Transmembrane Domain of the Amyloid Precursor Protein</article-title><trans-title-group xml:lang="ru"><trans-title>Structural and Dynamic Study of the Transmembrane Domain of the Amyloid Precursor Protein</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name><surname>Nadezhdin</surname><given-names>K D</given-names></name><email>bon@nmr.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Bocharova</surname><given-names>O V</given-names></name><email>bon@nmr.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Bocharov</surname><given-names>E V</given-names></name><email>bon@nmr.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Arseniev</surname><given-names>A S</given-names></name><email>bon@nmr.ru</email><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences</institution></aff><aff><institution xml:lang="ru"></institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2011-03-15" publication-format="electronic"><day>15</day><month>03</month><year>2011</year></pub-date><volume>3</volume><issue>1</issue><issue-title xml:lang="en">VOL 3, NO1 (2011)</issue-title><issue-title xml:lang="ru">ТОМ 3, №1 (2011)</issue-title><fpage>69</fpage><lpage>76</lpage><history><date date-type="received" iso-8601-date="2020-01-17"><day>17</day><month>01</month><year>2020</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2011, Nadezhdin K.D., Bocharova O.V., Bocharov E.V., Arseniev A.S.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2011, Nadezhdin K.D., Bocharova O.V., Bocharov E.V., Arseniev A.S.</copyright-statement><copyright-year>2011</copyright-year><copyright-holder xml:lang="en">Nadezhdin K.D., Bocharova O.V., Bocharov E.V., Arseniev A.S.</copyright-holder><copyright-holder xml:lang="ru">Nadezhdin K.D., Bocharova O.V., Bocharov E.V., Arseniev A.S.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://actanaturae.ru/2075-8251/article/view/10695">https://actanaturae.ru/2075-8251/article/view/10695</self-uri><abstract xml:lang="en"><p/></abstract><trans-abstract xml:lang="ru"><p>Alzheimer’s disease affects people all over the world, regardless of nationality, gender or social status. An adequate study of the disease requires essential understanding of the molecular fundamentals of the pathogenesis. The amyloid β-peptide, which forms amyloid plaques in the brain of people with Alzheimer’s disease, is the product of sequential cleavage of a single-span membrane amyloid precursor protein (APP). More than half of the APP mutations found to be associated with familial forms of Alzheimer’s disease are located in its transmembrane domain. The pathogenic mutations presumably affect the structural-dynamic properties of the APP transmembrane domain by changing its conformational stability and/or lateral dimerization. In the present study, the structure and dynamics of the recombinant peptide corresponding to the APP fragment, Gln686-Lys726, which comprises the APP transmembrane domain with an adjacent N-terminal juxtamembrane sequence, were determined in the membrane mimetic environment composed of detergent micelles using NMR spectroscopy. The structure obtained in dodecylphosphocholine micelles consists of two α-helices: a short surface-associated juxtamembrane helix (Lys687-Asp694) and a long transmembrane helix (Gly700-Leu723), both connected via a mobile loop region. A minor bend of the transmembrane α-helix is observed near the paired residues Gly708-Gly709. A cholesterol-binding hydrophobic cavity is apparently formed under the loop region, where the juxtamembrane α-helix comes into contact with the membrane surface near the N-terminus of the transmembrane α-helix.</p></trans-abstract><kwd-group xml:lang="en"><kwd>Alzheimer’s disease</kwd><kwd>amyloid precursor protein</kwd><kwd>transmembrane domain</kwd><kwd>NMR spectroscopy</kwd><kwd>spatial structure</kwd><kwd>dynamics</kwd></kwd-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Grigorenko A.P., Rogaev E.I. // Mol. Biol. (Mosk). 2007. V. 41. P. 331-345.</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Duce J.A., Tsatsanis A., Cater M.A., James S.A., Robb E., Wikhe K., Leong S.L., Perez K., Johanssen T., Greenough M.A., et al. // Cell. 2010. V. 142. P. 857-867.</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Rauk A. // Dalton Trans. 2008. V. 14. P. 1273-1282.</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Selkoe D.J. // Nature. 2003. V. 426. P. 900-904.</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Steiner H., Fluhrer R., Haass C. // J. Biol. Chem. 2008. V. 283. P. 29627-29631.</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Soscia S.J., Kirby J.E., Washicosky K.J., Tucker S.M., Ingelsson M., Hyman B., Burton M.A., Goldstein L.E., Duong S., Tanzi R.E., Moir R.D. // PLoS One. 2010. V. 5. P. e9505.</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Thinakaran G., Koo E.H. // J. Biol. Chem. 2008. V. 283. P. 29615-29619.</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Wiley J.C., Hudson M., Kanning K.C., Schecterson L.C., Bothwell M. // J. Neurochem. 2005. V. 94. P. 1189-1201.</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Gorman P.M., Kim S., Guo M., Melnyk R.A., McLaurin J., Fraser P.E., Bowie J.U., Chakrabartty A. // BMC Neuroscience. 2008. V. 9. P. 17-27.</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Munter L.M., Voigt P., Harmeier A., Kaden D., Gottschalk K.E., Weise C., Pipkorn R., Schaefer M., Langosch D., Multhaup G. // EMBO J. 2007. V. 26. P. 1702-1712.</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Kienlen-Campard P., Tasiaux B., van Hees J., Li M., Huysseune S., Sato T., Fei J.Z., Aimoto S., Courtoy P.J., Smith S.O., et al. // J. Biol. Chem. 2008. V. 283. P. 7733-7744.</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Marenchino M., Williamson P.T., Murri S., Zandomeneghi G., Wunderli-Allenspach H., Meier B.H., Kramer S.D. // Biophys. J. 2008. V. 95. P. 1460-1473.</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Beel A.J., Mobley C.K., Kim H.J., Tian F., Hadziselimovic A., Jap B., Prestegard J.H., Sanders C.R. // Biochemistry. 2008. V. 47. P. 9428-9446.</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Curtain C.C., Ali F., Volitakis I., Cherny R.A., Norton R.S., Beyreuther K., Barrow C.J., Masters C.L., Bush A.I., Barnham K.J. // J. Biol. Chem. 2001. V. 276. P. 20466-20473.</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Bokvist M., Lindstrom F., Watts A., Grubner G. // J. Mol. Biol. 2004. V. 335. P. 1039-1049.</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Bocharova O.V., Nadezhdin K.D., Bocharov E.V., Arseniev A.S. // Bioorg. Khim. 2010. V. 36. P. 105-111.</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Keller R.L.J. The Computer Aided Resonance Assignment Tutorial., Goldau, Switzerland: CANTINA Verlag, 2004. 81 p.</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Cavanagh J., Fairbrother W.J., Palmer A.G., Skelton N.J. Protein NMR spectroscopy: principles and practice. 2nd ed. San Diego, CA, USA: Acad. Press, 2007. 886 p.</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Bocharov E.V., Korzhnev D.M., Blommers M.J., Arvinte T., Orekhov V.Y., Billeter M., Arseniev A.S. // J. Biol. Chem. 2002. V. 277. P. 46273-46279.</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Guntert P. // Prog. Nucl. Magn. Reson. Spectrosc. 2003. V. 43. P. 105-125.</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Cornilescu G., Delaglio F., Bax A. // J. Biomol. NMR. 1999. V. 13. P. 289-302.</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Baker E.N., Hubbard R.E. // Prog. Biophys. Molec. Biol. 1984. V. 44. P. 97-179.</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Koradi R., Billeter M., Wuthrich K.J. // Mol. Graphics. 1996. V. 14. P. 51-55.</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Wagner G., Pardi A., Wuthrich K. // J. Am. Chem. Soc. 1983. V. 105. P. 5948-5949.</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Daragan V.A., Mayo K.H. // Prog. Nucl. Magn. Reson. Spectrosc. 1997. V. 31. P. 63-105.</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Lazaridis T., Mallik B., Chen Y. // J. Phys. Chem. B. 2005. V. 109. P. 15098-15106.</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Vetrivel K.S., Thinakaran G. // Biochim. Biophys. Acta. 2010. V. 1801. P. 860-867.</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Beel A.J., Sakakura M., Barrett P.J., Sanders C.R. // Biochim. Biophys. Acta. 2010. V. 1801. P. 975-982.</mixed-citation></ref></ref-list></back></article>
