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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Acta Naturae</journal-id><journal-title-group><journal-title xml:lang="en">Acta Naturae</journal-title><trans-title-group xml:lang="ru"><trans-title>Acta Naturae</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2075-8251</issn><publisher><publisher-name xml:lang="en">Acta Naturae Ltd</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">10547</article-id><article-id pub-id-type="doi">10.32607/20758251-2014-6-3-106-109</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Short communications</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Краткие сообщения</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression</article-title><trans-title-group xml:lang="ru"><trans-title>Возможная функция гена ribT Bacillus subtilis: теоретическое предсказание, клонирование и экспрессия</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Yakimov</surname><given-names>A. P.</given-names></name><name xml:lang="ru"><surname>Якимов</surname><given-names>А. П.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Seregina</surname><given-names>T. A.</given-names></name><name xml:lang="ru"><surname>Серегина</surname><given-names>Т. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Kholodnyak</surname><given-names>A. A.</given-names></name><name xml:lang="ru"><surname>Холодняк</surname><given-names>А. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Kreneva</surname><given-names>R. A.</given-names></name><name xml:lang="ru"><surname>Кренева</surname><given-names>Р. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Mironov</surname><given-names>A. S.</given-names></name><name xml:lang="ru"><surname>Миронов</surname><given-names>А. С.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Perumov</surname><given-names>D. A.</given-names></name><name xml:lang="ru"><surname>Перумов</surname><given-names>Д. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Timkovskii</surname><given-names>A. L.</given-names></name><name xml:lang="ru"><surname>Тимковский</surname><given-names>А. Л.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alt@AT1660.spb.edu</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">B.P. Konstantinov Petersburg Nuclear Physics Institute, National Research Center “Kurchatov Institute”</institution></aff><aff><institution xml:lang="ru">Петербургский институт ядерной физики им. Б.П. Константинова НИЦ Курчатовский институт</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">St. Petersburg State Polytechnical University</institution></aff><aff><institution xml:lang="ru">Санкт-Петербургский государственный политехнический университет</institution></aff></aff-alternatives><aff-alternatives id="aff3"><aff><institution xml:lang="en">State Research Institute of Genetics and Selection of Industrial Microorganisms</institution></aff><aff><institution xml:lang="ru">Государственный институт генетики и селекции промышленных микроорганизмов</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2014-09-15" publication-format="electronic"><day>15</day><month>09</month><year>2014</year></pub-date><volume>6</volume><issue>3</issue><issue-title xml:lang="en">VOL 6, NO3 (2014)</issue-title><issue-title xml:lang="ru">ТОМ 6, №3 (2014)</issue-title><fpage>106</fpage><lpage>109</lpage><history><date date-type="received" iso-8601-date="2020-01-17"><day>17</day><month>01</month><year>2020</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2014, Yakimov A.P., Seregina T.A., Kholodnyak A.A., Kreneva R.A., Mironov A.S., Perumov D.A., Timkovskii A.L.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2014, Якимов А.П., Серегина Т.А., Холодняк А.А., Кренева Р.А., Миронов А.С., Перумов Д.А., Тимковский А.Л.</copyright-statement><copyright-year>2014</copyright-year><copyright-holder xml:lang="en">Yakimov A.P., Seregina T.A., Kholodnyak A.A., Kreneva R.A., Mironov A.S., Perumov D.A., Timkovskii A.L.</copyright-holder><copyright-holder xml:lang="ru">Якимов А.П., Серегина Т.А., Холодняк А.А., Кренева Р.А., Миронов А.С., Перумов Д.А., Тимковский А.Л.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://actanaturae.ru/2075-8251/article/view/10547">https://actanaturae.ru/2075-8251/article/view/10547</self-uri><abstract xml:lang="en"><p>The complete decipherment of the functions and interactions of the elements of the riboflavin biosynthesis operon (rib operon) of Bacillus subtilis are necessary for the development of superproducers of this important vitamin. The function of its terminal ribT gene has not been established to date. In this work, a search for homologs of the hypothetical amino acid sequence of the gene product through databases, as well as an analysis of the homolgs, was performed; the distribution of secondary structure elements was theoretically predicted; and the tertiary structure of the RibT protein was proposed. The ribT gene nucleotide sequence was amplified and cloned into the standard high-copy expression vector pET15b and then expressed after induction with IPTG in E. coli BL21 (DE3) strain cells containing the inducible phage T7 RNA polymerase gene. The ribT gene expression was confirmed by SDS-PAGE. The protein product of the expression was purified by affinity chromatography. Therefore, the real possibility of RibT protein production in quantities sufficient for further investigation of its structure and functional activity was demonstrated.</p></abstract><trans-abstract xml:lang="ru"><p>Полная расшифровка функций и взаимодействия элементов оперона биосинтеза рибофлавина (rib-оперон) у Bacillus subtilis необходима для создания сверхпродуцентов этого важнейшего витамина. Функция гена ribT, замыкающего оперон, до сих пор не определена. В представленной работе проведен поиск гомологов гипотетической аминокислотной последовательности продукта этого гена в базах данных, а также анализ гомологий, теоретически предсказано распределение элементов вторичной структуры, предложена третичная структура белка RibT. Нуклеотидная последовательность гена ribT была амплифицирована и клонирована в стандартный мультикопийный экспрессионный вектор pET15b, а затем экспрессирована после индукции ИПТГ в клетках Escherichia coli BL21(DE3), содержавших индуцибельный ген РНК-полимеразы фага Т7. Экспрессия гена ribT подтверждена электрофорезом в полиакриламидном геле в денатурирующих условиях (SDS-PAGE). Белковый продукт экспрессии очищен с помощью аффинной хроматографии. Таким образом, показана принципиальная возможность получения белка RibT в количествах, достаточных для дальнейшего изучения его структуры и функциональной активности.</p></trans-abstract><kwd-group xml:lang="en"><kwd>proteomics</kwd><kwd>bioinformatics</kwd><kwd>homology search</kwd><kwd>theoretical protein structure</kwd><kwd>gene cloning</kwd><kwd>inducible expression</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>биоинформатика</kwd><kwd>индуцибельная экспрессия</kwd><kwd>клонирование гена</kwd><kwd>поиск гомологий</kwd><kwd>протеомика</kwd><kwd>теоретическая структура белка</kwd></kwd-group><funding-group><funding-statement xml:lang="en">This work was supported by the Russian Foundation for Basic Research (grant № 11-04-00476).</funding-statement><funding-statement xml:lang="ru">Работа поддержана РФФИ (грант № 11-04-00476).</funding-statement></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>[1] Chikindas M.L., Mironov V.N., Lukyanov E.V., Boretsky Yu.R., Arutyunova L.S., Rabinovich P.M., Stepanov A.I. // Mol. 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